Skip to content

Commit ddc2352

Browse files
author
github-action
committed
upload memtest results
1 parent 2e1b0ac commit ddc2352

405 files changed

Lines changed: 104457 additions & 0 deletions

File tree

Some content is hidden

Large Commits have some content hidden by default. Use the searchbox below for content that may be hidden.

‎log-files/2026-10-07_19-26-20-37657779390/Test1D3DLinearEllipticSolver_valgrind.txt‎

Lines changed: 268 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,268 @@
1+
==16804== Memcheck, a memory error detector
2+
==16804== Copyright (C) 2002-2024, and GNU GPL'd, by Julian Seward et al.
3+
==16804== Using Valgrind-3.26.0 and LibVEX; rerun with -h for copyright info
4+
==16804== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/Test1D3DLinearEllipticSolver -malloc_debug -malloc_dump -memory_info
5+
==16804== Parent PID: 16085
6+
==16804==
7+
==16804==
8+
==16804== FILE DESCRIPTORS: 11 open (6 inherited) at exit.
9+
==16804== Open file descriptor 10: /dev/shm/open_mpi.0000
10+
==16804== at 0xA8643B6: __open_nocancel (open64_nocancel.c:39)
11+
==16804== by 0xA7E8943: shm_open@@GLIBC_2.34 (shm_open.c:46)
12+
==16804== by 0xFC2089E: opal_shmem_posix_shm_open (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
13+
==16804== by 0xFC20A71: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
14+
==16804== by 0xFC1FC38: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
15+
==16804== by 0xFC1FF97: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
16+
==16804== by 0xFAEF159: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
17+
==16804== by 0xAA550E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
18+
==16804== by 0xAA5A49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
19+
==16804== by 0xAA5B2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
20+
==16804== by 0xAA5218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
21+
==16804== by 0xAA8C627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
22+
==16804== by 0x7159446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
23+
==16804== by 0x688F27F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
24+
==16804== by 0x688F2CD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
25+
==16804== by 0x406D554: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
26+
==16804== by 0x40679F1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
27+
==16804== by 0x406ADFE: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
28+
==16804== by 0x406AC91: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
29+
==16804== by 0x406B38B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
30+
==16804== by 0x4065E48: main (Test1D3DLinearEllipticSolver.cpp:18)
31+
==16804==
32+
{
33+
<insert_a_suppression_name_here>
34+
CoreError:FdNotClosed
35+
fun:__open_nocancel
36+
fun:shm_open@@GLIBC_2.34
37+
fun:opal_shmem_posix_shm_open
38+
obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5
39+
obj:/usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5
40+
fun:opal_shmem_base_select
41+
fun:opal_init
42+
fun:ompi_rte_init
43+
obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
44+
fun:ompi_mpi_instance_init
45+
fun:ompi_mpi_init
46+
fun:PMPI_Init_thread
47+
fun:PetscInitialize
48+
fun:_ZN15PetscSetupUtils15InitialisePetscEv
49+
fun:_ZN15PetscSetupUtils11CommonSetupEv
50+
fun:_ZN10PetscSetup10setUpWorldEv
51+
fun:_ZN7CxxTest20RealWorldDescription5setUpEv
52+
fun:_ZN7CxxTest10TestRunner8runWorldEv
53+
fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
54+
fun:_ZN7CxxTest14ErrorFormatter3runEv
55+
fun:main
56+
}
57+
==16804== Open file descriptor 9:
58+
==16804== at 0xA87284B: eventfd (syscall-template.S:120)
59+
==16804== by 0xFC80188: evutil_eventfd_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
60+
==16804== by 0xFC7E395: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
61+
==16804== by 0xFC7E704: evthread_make_base_notifiable (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
62+
==16804== by 0xFC7E9F1: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
63+
==16804== by 0xFBE50D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
64+
==16804== by 0xFBE51E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
65+
==16804== by 0xFAEF120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
66+
==16804== by 0xAA550E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
67+
==16804== by 0xAA5A49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
68+
==16804== by 0xAA5B2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
69+
==16804== by 0xAA5218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
70+
==16804== by 0xAA8C627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
71+
==16804== by 0x7159446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
72+
==16804== by 0x688F27F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
73+
==16804== by 0x688F2CD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
74+
==16804== by 0x406D554: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
75+
==16804== by 0x40679F1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
76+
==16804== by 0x406ADFE: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
77+
==16804== by 0x406AC91: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
78+
==16804== by 0x406B38B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
79+
==16804== by 0x4065E48: main (Test1D3DLinearEllipticSolver.cpp:18)
80+
==16804==
81+
{
82+
<insert_a_suppression_name_here>
83+
CoreError:FdNotClosed
84+
fun:eventfd
85+
fun:evutil_eventfd_
86+
obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
87+
fun:evthread_make_base_notifiable
88+
fun:event_base_new_with_config
89+
fun:opal_event_base_create
90+
fun:opal_event_init
91+
fun:opal_init
92+
fun:ompi_rte_init
93+
obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
94+
fun:ompi_mpi_instance_init
95+
fun:ompi_mpi_init
96+
fun:PMPI_Init_thread
97+
fun:PetscInitialize
98+
fun:_ZN15PetscSetupUtils15InitialisePetscEv
99+
fun:_ZN15PetscSetupUtils11CommonSetupEv
100+
fun:_ZN10PetscSetup10setUpWorldEv
101+
fun:_ZN7CxxTest20RealWorldDescription5setUpEv
102+
fun:_ZN7CxxTest10TestRunner8runWorldEv
103+
fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
104+
fun:_ZN7CxxTest14ErrorFormatter3runEv
105+
fun:main
106+
}
107+
==16804== Open file descriptor 8:
108+
==16804== at 0xA86313B: pipe2 (syscall-template.S:120)
109+
==16804== by 0xFC7FF87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
110+
==16804== by 0xFC82579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
111+
==16804== by 0xFC82774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
112+
==16804== by 0xFC7E8AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
113+
==16804== by 0xFBE50D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
114+
==16804== by 0xFBE51E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
115+
==16804== by 0xFAEF120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
116+
==16804== by 0xAA550E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
117+
==16804== by 0xAA5A49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
118+
==16804== by 0xAA5B2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
119+
==16804== by 0xAA5218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
120+
==16804== by 0xAA8C627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
121+
==16804== by 0x7159446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
122+
==16804== by 0x688F27F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
123+
==16804== by 0x688F2CD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
124+
==16804== by 0x406D554: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
125+
==16804== by 0x40679F1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
126+
==16804== by 0x406ADFE: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
127+
==16804== by 0x406AC91: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
128+
==16804== by 0x406B38B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
129+
==16804== by 0x4065E48: main (Test1D3DLinearEllipticSolver.cpp:18)
130+
==16804==
131+
{
132+
<insert_a_suppression_name_here>
133+
CoreError:FdNotClosed
134+
fun:pipe2
135+
fun:evutil_make_internal_pipe_
136+
fun:evsig_init_
137+
obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
138+
fun:event_base_new_with_config
139+
fun:opal_event_base_create
140+
fun:opal_event_init
141+
fun:opal_init
142+
fun:ompi_rte_init
143+
obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
144+
fun:ompi_mpi_instance_init
145+
fun:ompi_mpi_init
146+
fun:PMPI_Init_thread
147+
fun:PetscInitialize
148+
fun:_ZN15PetscSetupUtils15InitialisePetscEv
149+
fun:_ZN15PetscSetupUtils11CommonSetupEv
150+
fun:_ZN10PetscSetup10setUpWorldEv
151+
fun:_ZN7CxxTest20RealWorldDescription5setUpEv
152+
fun:_ZN7CxxTest10TestRunner8runWorldEv
153+
fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
154+
fun:_ZN7CxxTest14ErrorFormatter3runEv
155+
fun:main
156+
}
157+
==16804== Open file descriptor 7:
158+
==16804== at 0xA86313B: pipe2 (syscall-template.S:120)
159+
==16804== by 0xFC7FF87: evutil_make_internal_pipe_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
160+
==16804== by 0xFC82579: evsig_init_ (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
161+
==16804== by 0xFC82774: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
162+
==16804== by 0xFC7E8AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
163+
==16804== by 0xFBE50D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
164+
==16804== by 0xFBE51E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
165+
==16804== by 0xFAEF120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
166+
==16804== by 0xAA550E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
167+
==16804== by 0xAA5A49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
168+
==16804== by 0xAA5B2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
169+
==16804== by 0xAA5218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
170+
==16804== by 0xAA8C627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
171+
==16804== by 0x7159446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
172+
==16804== by 0x688F27F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
173+
==16804== by 0x688F2CD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
174+
==16804== by 0x406D554: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
175+
==16804== by 0x40679F1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
176+
==16804== by 0x406ADFE: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
177+
==16804== by 0x406AC91: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
178+
==16804== by 0x406B38B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
179+
==16804== by 0x4065E48: main (Test1D3DLinearEllipticSolver.cpp:18)
180+
==16804==
181+
{
182+
<insert_a_suppression_name_here>
183+
CoreError:FdNotClosed
184+
fun:pipe2
185+
fun:evutil_make_internal_pipe_
186+
fun:evsig_init_
187+
obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
188+
fun:event_base_new_with_config
189+
fun:opal_event_base_create
190+
fun:opal_event_init
191+
fun:opal_init
192+
fun:ompi_rte_init
193+
obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
194+
fun:ompi_mpi_instance_init
195+
fun:ompi_mpi_init
196+
fun:PMPI_Init_thread
197+
fun:PetscInitialize
198+
fun:_ZN15PetscSetupUtils15InitialisePetscEv
199+
fun:_ZN15PetscSetupUtils11CommonSetupEv
200+
fun:_ZN10PetscSetup10setUpWorldEv
201+
fun:_ZN7CxxTest20RealWorldDescription5setUpEv
202+
fun:_ZN7CxxTest10TestRunner8runWorldEv
203+
fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
204+
fun:_ZN7CxxTest14ErrorFormatter3runEv
205+
fun:main
206+
}
207+
==16804== Open file descriptor 4:
208+
==16804== at 0xA87334B: epoll_create1 (syscall-template.S:120)
209+
==16804== by 0xFC826FA: ??? (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
210+
==16804== by 0xFC7E8AA: event_base_new_with_config (in /usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1)
211+
==16804== by 0xFBE50D7: opal_event_base_create (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
212+
==16804== by 0xFBE51E8: opal_event_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
213+
==16804== by 0xFAEF120: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.80.0.5)
214+
==16804== by 0xAA550E7: ompi_rte_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
215+
==16804== by 0xAA5A49F: ??? (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
216+
==16804== by 0xAA5B2C3: ompi_mpi_instance_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
217+
==16804== by 0xAA5218F: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
218+
==16804== by 0xAA8C627: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7)
219+
==16804== by 0x7159446: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.4)
220+
==16804== by 0x688F27F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
221+
==16804== by 0x688F2CD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
222+
==16804== by 0x406D554: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
223+
==16804== by 0x40679F1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
224+
==16804== by 0x406ADFE: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
225+
==16804== by 0x406AC91: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
226+
==16804== by 0x406B38B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
227+
==16804== by 0x4065E48: main (Test1D3DLinearEllipticSolver.cpp:18)
228+
==16804==
229+
{
230+
<insert_a_suppression_name_here>
231+
CoreError:FdNotClosed
232+
fun:epoll_create1
233+
obj:/usr/lib/x86_64-linux-gnu/libevent_core-2.1.so.7.0.1
234+
fun:event_base_new_with_config
235+
fun:opal_event_base_create
236+
fun:opal_event_init
237+
fun:opal_init
238+
fun:ompi_rte_init
239+
obj:/usr/lib/x86_64-linux-gnu/libmpi.so.40.40.7
240+
fun:ompi_mpi_instance_init
241+
fun:ompi_mpi_init
242+
fun:PMPI_Init_thread
243+
fun:PetscInitialize
244+
fun:_ZN15PetscSetupUtils15InitialisePetscEv
245+
fun:_ZN15PetscSetupUtils11CommonSetupEv
246+
fun:_ZN10PetscSetup10setUpWorldEv
247+
fun:_ZN7CxxTest20RealWorldDescription5setUpEv
248+
fun:_ZN7CxxTest10TestRunner8runWorldEv
249+
fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
250+
fun:_ZN7CxxTest14ErrorFormatter3runEv
251+
fun:main
252+
}
253+
==16804==
254+
==16804== HEAP SUMMARY:
255+
==16804== in use at exit: 126,392 bytes in 901 blocks
256+
==16804== total heap usage: 31,304 allocs, 30,403 frees, 11,194,918 bytes allocated
257+
==16804==
258+
==16804== LEAK SUMMARY:
259+
==16804== definitely lost: 0 bytes in 0 blocks
260+
==16804== indirectly lost: 0 bytes in 0 blocks
261+
==16804== possibly lost: 0 bytes in 0 blocks
262+
==16804== still reachable: 11,909 bytes in 44 blocks
263+
==16804== suppressed: 114,483 bytes in 857 blocks
264+
==16804== Reachable blocks (those to which a pointer was found) are not shown.
265+
==16804== To see them, rerun with: --leak-check=full --show-leak-kinds=all
266+
==16804==
267+
==16804== For lists of detected and suppressed errors, rerun with: -s
268+
==16804== ERROR SUMMARY: 5 errors from 5 contexts (suppressed: 33 from 33)

0 commit comments

Comments
 (0)