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_config.yml

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@@ -414,7 +414,7 @@ ontologies:
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ontology_purl: http://purl.obolibrary.org/obo/BMONT.owl
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repository: https://github.com/SCAI-BIO/BiomarkerOntology
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title: Biomarker Ontology
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tracker: https://github.com/SCAI-BIO/BiomarkerOntology/issue
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tracker: https://github.com/SCAI-BIO/BiomarkerOntology/issues
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- activity_status: active
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build:
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checkout: git clone https://github.com/obophenotype/biological-spatial-ontology.git

_data/roles.yml

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- name: Code of Conduct Committee Member
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open: true
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description: |
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The Code of Conduct (COC) Committee member is responsible for ensuring the OBO Code of Conduct is upheld.
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They are, in particular, available for anyone in the community to be contacted individually or as a group.
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commitment: 0-6 hours per month
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requirements:
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- being able to deal with sensitive interpersonal issues discreetly
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- being willing to mediate between conflicting viewpoints
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- being highly available when issues arise
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- fully embracing the OBO Code of Conduct
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responsibilities:
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- Being available to receive COC-related issues via email from anyone in the community, and dealing with them discreetly (not sharing any part of the communication without permission)
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- Developing strategies for dealing with COC-related issues according to established COC protocols
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- Ensuring that the OBO Code of Conduct is upheld around matters directly related to the OBO Foundry
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- (Other responsibilities are yet to be defined for this role)
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people:
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- github: addiehl
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name: Alexander Diehl
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orcid: 0000-0001-9990-8331
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status: support
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start: "2023-06-16"
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- github: lschriml
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name: Lynn Schriml
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orcid: 0000-0001-8910-9851
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status: support
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start: "2023-06-16"
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- github: matentzn
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name: Nico Matentzoglu
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orcid: 0000-0002-7356-1779
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status: support
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start: "2023-06-16"
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- name: Registry Metadata Steward
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open: false
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commitment: 2-6 hours per month
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requirements:
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- love for metadata
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- basic python
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- community mindset
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description: You are responsible for shepherding our registry
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metadata according to our principles and SOPs, merge changes and generally
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protect and guard them. This involves also facilitating the implementation of QC
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description: Responsible for shepherding our registry
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metadata according to our principles and SOPs, merging changes and generally
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protecting and guarding them. This also involves facilitating the implementation of QC
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checks.
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sop: /roles/metadata-steward
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responsibilities:
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- Community mindset
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- Stakeholder support
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description:
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You will be responsible for registering new ontologies at the OBO dashboard and helping their
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owners pass them.
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Responsible for assinging reviewers to new ontology requests, registering new ontologies in the OBO dashboard and helping their
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owners pass all the dashboard checks.
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sop: /roles/nor-manager
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responsibilities:
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- Checking OBOFoundry.github.io at least weekly for NOR related issues and pull requests.
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- Checking OBOFoundry.github.io at least weekly for NOR-related issues and pull requests.
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- Managing the NOR Process (https://obofoundry.org/docs/SOP.html#NOR)
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- Assisting NOR submitters to understanding the NOR process and passing the NOR Dashboard
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- Assigning and reminding OBO Operations Committee Members as reviewers
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- Working knowledge of python
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- "Nice to have: knowledge of jekyll and liquid (like jinja)"
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- Should have technical background
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description: You will be responsible for gatekeeping community changes to the website.
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description: Responsible for gatekeeping community changes to the website.
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sop: /roles/website-coordinator
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responsibilities:
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people:
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- github: erik-whiting
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name: Erik Whiting
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orcid: 0000-0003-1022-5281
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status: lead
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start: 2022-12
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- github: matentzn
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name: Nico Matentzoglu
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orcid: 0000-0002-7356-1779
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status: support
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start: "0000-00-00"
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- github: jsstevenson
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name: James Stevenson
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orcid: 0000-0002-2568-6163
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status: lead
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start: "2025-00-00"
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- name: OBO Slack Community Manager
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open: false
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commitment: 1-3 hours per month
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requirements:
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- love for communication
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- passion for community building
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- community mindset
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description: You are responsible for managing the OBO Slack community. This role includes issues like welcoming new members, deleting old ones, sending invites and directing people to the right channels.
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description: Responsible for managing the OBO Slack community, including tasks like welcoming new members, deleting old ones, sending invites and directing people to the right channels.
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responsibilities:
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- Adding people to the OBO slack space on request, using the 'invite members' feature
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- Adding people to the OBO Slack space on request, using the 'invite members' feature
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- "Welcoming new members once per week in the #general channel"
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- Directing people to the appropriate channels to use for an inquiry
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- Inactivating accounts on request
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commitment: 2-4 hours per month
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requirements:
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- Should have a basic journalistic instinct, compiling the most relevant discussion points, decisions and issues for the wider community
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description: You will be responsible for managing, compiling and disseminating the OBO Newsletter. Instructions for archiving the newsletter on the OBO Foundry's GitHub Repository can be found [here](https://github.com/OBOFoundry/OBOFoundry.github.io/blob/master/CONTRIBUTING.md#newsletter).
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description: Responsible for managing, compiling and disseminating the OBO Newsletter. Instructions for archiving the newsletter on the OBO Foundry's GitHub Repository can be found [here](https://github.com/OBOFoundry/OBOFoundry.github.io/blob/master/CONTRIBUTING.md#newsletter).
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responsibilities:
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- Manage a Google doc with the current and previous newsletter drafts based on the newsletter skeleton
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- Add GitHub issues and/or pull requests tagged with "newsletter" to the newsletter, with one or two sentences of summary
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- Summarise key developments (ongoing and past) to the community, based on reports of the working groups to the Operations Committee meeting
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- Summarise key decisions from the OBO operations calls
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- Proactively finalise the newsletter draft for the last meeting of March, June, September and December, and requesting feedback
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- After 10 days of requesting feedback, send the newsletter to obo-discuss mailing list
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- Once the newsletter content has been approved, send the newsletter to the obo-discuss mailing list
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people:
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- github: LK112019
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name: Leila Kiani
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commitment: 2-10 hours per month
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requirements:
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- Basic knowledge of dashboard
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- Social skills are a nice to have
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- Social skills are nice to have
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- Infinite patience also helpful
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description: Updating the OBO Dashboard once per month.
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Fixing horrible bugs in OBO-Dashboard if they come up (should be rare).
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Working with OBO Ops to find people for extending dashboard when new principles come along.
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description: Keep OBO Dashboard up to date
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sop: /roles/dashboard-manager
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responsibilities:
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- Updating the OBO Dashboard once per month.
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- Fixing horrible bugs in OBO-Dashboard if they come up (should be rare).
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- Working with OBO Ops to find people for extending dashboard when new principles come along.
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people:
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- github: anitacaron
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name: Anita Caron
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open: false
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commitment: 2 hours per month
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requirements:
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- Strong python skills
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- Some level of pro-activity helpful
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- Experience with ODK/docker
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description:
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Preparing a short report about all general developments in OBO Technical
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Working Group (TWG) for the OBO Operations team meeting. You will go
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through pull requests and emails and summarize in bullet points and report
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to OBO Ops.
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- No programming ability needed, but should be able to follow technical discussions
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- Willingness to attend TWG meetings and collect notes
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description: Technical Working Group (TWG) representative who serves as a liaison to the OBO Foundry Operations Committee (OFOC).
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sop: /roles/twg-ops-liaison
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responsibilities:
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- Report TWG progress at OFOC calls
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- Serve as a first point of contact for OFOC and OBO Community for technical Q/A
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- Mark relevant GitHub issues for discussion during OFOC call
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- Summarise TWG activities to OBO Newsletter steward
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people:
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- github: rays22
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name: Ray Stefancsik
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- name: OMO metadata coordinator
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open: false
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description: |
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You will be responsible for registering new ontologies at the OBO dashboard and helping their
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owners pass them.
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Responsible for coordinating changes to the OBO Metadata Ontology (OMO).
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OMO reflects OBO consensus on term and ontology metadata in OBO ontologies.
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Changes need to be carefully reviewed and votes called if needed. No PR should be merged
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in OMO without the consent of the OMO metadata coordinator.
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responsibilities:
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people:
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- name: Jie Zheng
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- name: OBO Tools coordinator
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open: false
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description: |
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Coordinating and hosting OBO Tools workshops at meetings and conferences such as ICBO, and
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making sure tools align with OBO principles and support them, etc.)
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Coordinate and host OBO Tools workshops at meetings and conferences such as ICBO,
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make sure tools align with OBO principles and support them, etc.
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responsibilities:
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people:
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- name: James A. Overton
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- name: OBO Academy
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open: false
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description: |
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Maintaining https://oboacademy.github.io/obook/ and organising OBO Tutorials.
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Maintain https://oboacademy.github.io/obook/; organize and advertise OBO Tutorials.
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responsibilities:
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people:
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- name: Nicole Vasilevsky
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orcid: 0000-0001-5139-5557
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status: support
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start: 2021-06
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- name: Rebecca Jackson
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github: beckyjackson
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orcid: 0000-0003-4871-5569
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status: support
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start: 2021-06
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- name: Shawn Tan
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github: shawntanzk
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orcid: 0000-0001-7258-9596
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status: support
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start: "2022"
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- name: OBO Issue Tracker Shepherd
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open: false
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description: |
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Assigning incoming issues at https://github.com/OBOFoundry/OBOFoundry.github.io, tagging them, chasing them
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Keep an eye on issues in the GitHub issue tracker and help keep them prioritized appropriately
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responsibilities:
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- "Tagging metadata related issues with 'attn: Technical Working WG' and 'metadata'."
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- Monitor issues at https://github.com/OBOFoundry/OBOFoundry.github.io, tag them, follow up on them as needed
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people:
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- name: Nomi Harris
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github: nlharris
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- name: OBO Google Service Manager
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open: true
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description: |
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Managing the OBO Google Drives, Calendars, Mailing list and Meeting Minutes
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Manage the OBO Google Drives, calendars, mailing list (Google Group) and meeting minutes
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responsibilities:
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- Adding and removing people from OBO Mailing Lists
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- Adding new OBO Ops members to Google Drive and removing alumni
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- Adding important OBO events to the OBO calendar and sending out invites
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- Managing public and internal OBO Google Drives
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- Reporting adding members to any OBO Google drive with Write or Admin rights to the OBO Operations Committee
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people:
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- github: nlharris
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name: Nomi Harris
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orcid: 0000-0001-6315-3707
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status: lead
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start: 2019-01
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- name: Code of Conduct Committee Member
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open: true
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description: |
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Code of Conduct (COC) Committee members are responsible for ensuring the OBO Code of Conduct is upheld.
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They are, in particular, available for anyone in the community to be contacted individually or as a group.
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commitment: 0-6 hours per month
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requirements:
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- being able to deal with sensitive interpersonal issues discreetly
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- being willing to mediate between conflicting viewpoints
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- being highly available when issues arise
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- fully embracing the OBO Code of Conduct
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responsibilities:
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- Being available to receive COC-related issues via email from anyone in the community, and dealing with them discreetly (not sharing any part of the communication without permission)
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- Developing strategies for dealing with COC-related issues according to established COC protocols
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- Ensuring that the OBO Code of Conduct is upheld around matters directly related to the OBO Foundry
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- (Other responsibilities are yet to be defined for this role)
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people:
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- github: addiehl
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name: Alexander Diehl
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orcid: 0000-0001-9990-8331
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status: support
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start: "2023-06-16"
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- github: lschriml
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name: Lynn Schriml
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orcid: 0000-0001-8910-9851
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status: support
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start: "2023-06-16"
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- github: matentzn
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name: Nico Matentzoglu
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orcid: 0000-0002-7356-1779
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status: support
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start: "2023-06-16"

docs/CompletedReviews.md

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title: Completed Reviews
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---
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This page lists OBO Foundry ontologies that have gone through the current [review process](http://obofoundry.org/docs/ReviewProcessGuidelines). OBO Foundry ontologies added in 2010 were reviewed using a similar but non-identical process.
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This page lists OBO Foundry ontologies that have gone through the current [review process](http://obofoundry.org/docs/OntologiesReviewWorkflow). OBO Foundry ontologies added in 2010 were reviewed using a similar but non-identical process.
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<style type="text/css">
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docs/ReviewCriteriaPolicies.md

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docs/ReviewProcessGuidelines.md

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