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🚀 Automatically rebuilt derived files (#2777)
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‎_config.yml‎

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@@ -5231,6 +5231,23 @@ ontologies:
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repository: https://github.com/OOSTT/OOSTT
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title: Ontology of Organizational Structures of Trauma centers and Trauma systems
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tracker: https://github.com/OOSTT/OOSTT/issues
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usages:
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- description: OOSTT terms, such as OOSTT_00000017 'trauma program' and OOSTT_00000021
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'trauma medical director role,' are used in the CAFE questionnaire to assess
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trauma centers and systems.
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type: application
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user: https://cafe-trauma.com/
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- description: OOSTT terms, such as OOSTT_00000002 'trauma center' and OOSTT_00000066
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'emergency medicine liaison role,' are used in the TIPTOE questionnaire to relate
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trauma center/system structure to patient outcomes.
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type: application
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user: https://tiptoe.apps.dbmi.cloud/tiptoe
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- description: Terms from OOSTT are imported and used by OMRSE.
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examples:
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- description: academic degree
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url: http://purl.obolibrary.org/obo/OOSTT_00000074
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type: owl:Ontology
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user: https://github.com/mcwdsi/OMRSE
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- activity_status: active
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contact:
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email: zhengj2007@gmail.com
@@ -6454,7 +6471,7 @@ ontologies:
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build:
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infallible: 1
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method: obo2owl
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source_url: https://raw.githubusercontent.com/DiseaseOntology/SymptomOntology/master/symp.obo
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source_url: https://raw.githubusercontent.com/DiseaseOntology/SymptomOntology/master/src/ontology/symp.obo
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contact:
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email: lynn.schriml@gmail.com
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github: lschriml
@@ -6464,7 +6481,7 @@ ontologies:
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changes in function, sensations or appearance reported by a patient indicative
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of a disease.
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domain: health
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homepage: http://symptomontologywiki.igs.umaryland.edu/mediawiki/index.php/Main_Page
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homepage: https://github.com/DiseaseOntology/SymptomOntology
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id: symp
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layout: ontology_detail
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license:
@@ -6496,8 +6513,8 @@ ontologies:
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- description: Symptoms of human diseases in the DO
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examples:
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- description: symptoms of human diseases
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url: http://www.disease-ontology.org/?id=DOID:0060164
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user: http://www.disease-ontology.org
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url: https://disease-ontology.org/?id=DOID:0060164
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user: https://disease-ontology.org/
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- activity_status: active
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contact:
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email: allyson.lister@oerc.ox.ac.uk
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title: Pathogen Transmission Ontology
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tracker: https://github.com/DiseaseOntology/PathogenTransmissionOntology/issues
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usages:
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- description: Methods of trnasmission of human diseases in the DO
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- description: Methods of transmission of human diseases in the DO
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examples:
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- description: methods of transmission of human diseases
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url: http://www.disease-ontology.org/?id=DOID:12365
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user: http://www.disease-ontology.org
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url: https://disease-ontology.org/?id=DOID:12365
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user: https://disease-ontology.org/
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- activity_status: active
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contact:
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email: balhoff@renci.org

‎registry/ontologies.jsonld‎

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@@ -7264,7 +7264,30 @@
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],
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"repository": "https://github.com/OOSTT/OOSTT",
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"title": "Ontology of Organizational Structures of Trauma centers and Trauma systems",
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"tracker": "https://github.com/OOSTT/OOSTT/issues"
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"tracker": "https://github.com/OOSTT/OOSTT/issues",
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"usages": [
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{
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"description": "OOSTT terms, such as OOSTT_00000017 'trauma program' and OOSTT_00000021 'trauma medical director role,' are used in the CAFE questionnaire to assess trauma centers and systems.",
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"type": "application",
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"user": "https://cafe-trauma.com/"
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},
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{
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"description": "OOSTT terms, such as OOSTT_00000002 'trauma center' and OOSTT_00000066 'emergency medicine liaison role,' are used in the TIPTOE questionnaire to relate trauma center/system structure to patient outcomes.",
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"type": "application",
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"user": "https://tiptoe.apps.dbmi.cloud/tiptoe"
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},
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{
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"description": "Terms from OOSTT are imported and used by OMRSE.",
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"examples": [
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{
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"description": "academic degree",
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"url": "http://purl.obolibrary.org/obo/OOSTT_00000074"
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}
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],
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"type": "owl:Ontology",
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"user": "https://github.com/mcwdsi/OMRSE"
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}
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]
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},
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{
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"activity_status": "active",
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"build": {
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"infallible": 1,
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"method": "obo2owl",
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"source_url": "https://raw.githubusercontent.com/DiseaseOntology/SymptomOntology/master/symp.obo"
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"source_url": "https://raw.githubusercontent.com/DiseaseOntology/SymptomOntology/master/src/ontology/symp.obo"
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},
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"contact": {
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"email": "lynn.schriml@gmail.com",
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},
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"description": "An ontology of disease symptoms, with symptoms encompasing perceived changes in function, sensations or appearance reported by a patient indicative of a disease.",
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"domain": "health",
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"homepage": "http://symptomontologywiki.igs.umaryland.edu/mediawiki/index.php/Main_Page",
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"homepage": "https://github.com/DiseaseOntology/SymptomOntology",
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"id": "symp",
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"layout": "ontology_detail",
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"license": {
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"examples": [
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{
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"description": "symptoms of human diseases",
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"url": "http://www.disease-ontology.org/?id=DOID:0060164"
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"url": "https://disease-ontology.org/?id=DOID:0060164"
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}
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],
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"user": "http://www.disease-ontology.org"
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"user": "https://disease-ontology.org/"
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}
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]
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},
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"tracker": "https://github.com/DiseaseOntology/PathogenTransmissionOntology/issues",
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"usages": [
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{
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"description": "Methods of trnasmission of human diseases in the DO",
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"description": "Methods of transmission of human diseases in the DO",
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"examples": [
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{
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"description": "methods of transmission of human diseases",
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"url": "http://www.disease-ontology.org/?id=DOID:12365"
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"url": "https://disease-ontology.org/?id=DOID:12365"
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}
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],
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"user": "http://www.disease-ontology.org"
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"user": "https://disease-ontology.org/"
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}
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]
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},

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