Skip to content

Commit fa4b255

Browse files
🚀 Automatically rebuilt derived files (#2666)
Co-authored-by: GitHub Action <action@github.com>
1 parent 2d8ace1 commit fa4b255

5 files changed

Lines changed: 1562 additions & 1407 deletions

File tree

_config.yml

Lines changed: 34 additions & 6 deletions
Original file line numberDiff line numberDiff line change
@@ -799,9 +799,9 @@ ontologies:
799799
label: Alexander Diehl
800800
orcid: 0000-0001-9990-8331
801801
dependencies:
802-
- id: chebi
803802
- id: go
804803
- id: ncbitaxon
804+
- id: omo
805805
- id: pato
806806
- id: pr
807807
- id: ro
@@ -829,29 +829,57 @@ ontologies:
829829
ontology_purl: http://purl.obolibrary.org/obo/cl.owl
830830
title: Main CL OWL edition
831831
uses:
832-
- uberon
833-
- chebi
834832
- go
835-
- pr
836-
- pato
837833
- ncbitaxon
834+
- omo
835+
- pato
836+
- pr
838837
- ro
838+
- uberon
839839
- derived_from: cl.owl
840840
description: Complete ontology, plus inter-ontology axioms, and imports modules
841841
merged in
842842
format: obo
843843
id: cl.obo
844844
ontology_purl: http://purl.obolibrary.org/obo/cl.obo
845845
title: CL obo format edition
846+
- derived_from: cl.owl
847+
description: Complete ontology, plus inter-ontology axioms, and imports modules
848+
merged in
849+
format: json
850+
id: cl.json
851+
ontology_purl: http://purl.obolibrary.org/obo/cl.json
852+
title: CL OBOGraph-JSON format edition
853+
- description: Basic version, no inter-ontology axioms
854+
format: owl-rdf/xml
855+
id: cl/cl-basic.owl
856+
ontology_purl: http://purl.obolibrary.org/obo/cl/cl-basic.owl
857+
title: Basic CL
846858
- description: Basic version, no inter-ontology axioms
847859
format: obo
848860
id: cl/cl-basic.obo
849861
ontology_purl: http://purl.obolibrary.org/obo/cl/cl-basic.obo
850-
title: Basic CL
862+
title: Basic CL (OBO version)
863+
- description: Basic version, no inter-ontology axioms
864+
format: json
865+
id: cl/cl-basic.json
866+
ontology_purl: http://purl.obolibrary.org/obo/cl/cl-basic.json
867+
title: Basic CL (OBOGraph-JSON version)
851868
- description: complete CL but with no imports or external axioms
869+
format: owl-rdf/xml
852870
id: cl/cl-base.owl
853871
ontology_purl: http://purl.obolibrary.org/obo/cl/cl-base.owl
854872
title: CL base module
873+
- description: complete CL but with no imports or external axioms
874+
format: obo
875+
id: cl/cl-base.obo
876+
ontology_purl: http://purl.obolibrary.org/obo/cl/cl-base.obo
877+
title: CL base module (OBO version)
878+
- description: complete CL but with no imports or external axioms
879+
format: json
880+
id: cl/cl-base.json
881+
ontology_purl: http://purl.obolibrary.org/obo/cl/cl-base.json
882+
title: CL base module (OBOGraph-JSON version)
855883
publications:
856884
- id: https://www.ncbi.nlm.nih.gov/pubmed/27377652
857885
title: 'The Cell Ontology 2016: enhanced content, modularization, and ontology

registry/ontologies.jsonld

Lines changed: 46 additions & 9 deletions
Original file line numberDiff line numberDiff line change
@@ -1088,15 +1088,15 @@
10881088
"orcid": "0000-0001-9990-8331"
10891089
},
10901090
"dependencies": [
1091-
{
1092-
"id": "chebi"
1093-
},
10941091
{
10951092
"id": "go"
10961093
},
10971094
{
10981095
"id": "ncbitaxon"
10991096
},
1097+
{
1098+
"id": "omo"
1099+
},
11001100
{
11011101
"id": "pato"
11021102
},
@@ -1134,13 +1134,13 @@
11341134
"ontology_purl": "http://purl.obolibrary.org/obo/cl.owl",
11351135
"title": "Main CL OWL edition",
11361136
"uses": [
1137-
"uberon",
1138-
"chebi",
11391137
"go",
1140-
"pr",
1141-
"pato",
11421138
"ncbitaxon",
1143-
"ro"
1139+
"omo",
1140+
"pato",
1141+
"pr",
1142+
"ro",
1143+
"uberon"
11441144
]
11451145
},
11461146
{
@@ -1151,18 +1151,55 @@
11511151
"ontology_purl": "http://purl.obolibrary.org/obo/cl.obo",
11521152
"title": "CL obo format edition"
11531153
},
1154+
{
1155+
"derived_from": "cl.owl",
1156+
"description": "Complete ontology, plus inter-ontology axioms, and imports modules merged in",
1157+
"format": "json",
1158+
"id": "cl.json",
1159+
"ontology_purl": "http://purl.obolibrary.org/obo/cl.json",
1160+
"title": "CL OBOGraph-JSON format edition"
1161+
},
1162+
{
1163+
"description": "Basic version, no inter-ontology axioms",
1164+
"format": "owl-rdf/xml",
1165+
"id": "cl/cl-basic.owl",
1166+
"ontology_purl": "http://purl.obolibrary.org/obo/cl/cl-basic.owl",
1167+
"title": "Basic CL"
1168+
},
11541169
{
11551170
"description": "Basic version, no inter-ontology axioms",
11561171
"format": "obo",
11571172
"id": "cl/cl-basic.obo",
11581173
"ontology_purl": "http://purl.obolibrary.org/obo/cl/cl-basic.obo",
1159-
"title": "Basic CL"
1174+
"title": "Basic CL (OBO version)"
1175+
},
1176+
{
1177+
"description": "Basic version, no inter-ontology axioms",
1178+
"format": "json",
1179+
"id": "cl/cl-basic.json",
1180+
"ontology_purl": "http://purl.obolibrary.org/obo/cl/cl-basic.json",
1181+
"title": "Basic CL (OBOGraph-JSON version)"
11601182
},
11611183
{
11621184
"description": "complete CL but with no imports or external axioms",
1185+
"format": "owl-rdf/xml",
11631186
"id": "cl/cl-base.owl",
11641187
"ontology_purl": "http://purl.obolibrary.org/obo/cl/cl-base.owl",
11651188
"title": "CL base module"
1189+
},
1190+
{
1191+
"description": "complete CL but with no imports or external axioms",
1192+
"format": "obo",
1193+
"id": "cl/cl-base.obo",
1194+
"ontology_purl": "http://purl.obolibrary.org/obo/cl/cl-base.obo",
1195+
"title": "CL base module (OBO version)"
1196+
},
1197+
{
1198+
"description": "complete CL but with no imports or external axioms",
1199+
"format": "json",
1200+
"id": "cl/cl-base.json",
1201+
"ontology_purl": "http://purl.obolibrary.org/obo/cl/cl-base.json",
1202+
"title": "CL base module (OBOGraph-JSON version)"
11661203
}
11671204
],
11681205
"publications": [

0 commit comments

Comments
 (0)