diff --git a/docs/StandardizationGuidelines.md b/docs/StandardizationGuidelines.md index 77e41c686..47cd3c7df 100644 --- a/docs/StandardizationGuidelines.md +++ b/docs/StandardizationGuidelines.md @@ -5,21 +5,20 @@ title: Ontology Standardization Guidelines ### Social -SOCIAL External axioms #1443 & #1991 | possible new "what to do with terms" principle (can be p14) ### Communication -COMMUNICATION Ontology subsets documentation #466 -COMMUNICATION Referring to taxa not in NCBITaxon #434 -COMMUNICATION Document how to add logo #72 -COMMUNICATION Short ontology descriptions #1968 -COMMUNICATION Documentation for license #1840 +COMMUNICATION Ontology subsets documentation [#466](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/446) +COMMUNICATION Referring to taxa not in NCBITaxon [#434](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/434) +COMMUNICATION Document how to add logo [#72](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/72) +COMMUNICATION Short ontology descriptions [#1968](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/1968) +COMMUNICATION Documentation for license [#1840](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/1840) ### Content -CONTENT Discourage BFO shadow classes #1539 +CONTENT Discourage BFO shadow classes [#1539](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/1539) CONTENT? Ignoring NCIT (no issue, but has come up that NCIT is not well-formed enough to be a concern re: things like overlap) -METADATA Term adoption #2330 (also #2324) +METADATA Term adoption [#2330](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/2330) and [#2324](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/2324) ### Technical @@ -33,16 +32,16 @@ Not yet classified: Every ontology MUST be coherent when classified together with RO, BFO, and COB Every ontology SHOULD be coherent when classified together with all its base-dependencies -METADATA Versioning term identifiers #1347 / -METADATA Linking term to discussion on tracker #1097 -METADATA Language tags #479 (also #325) -METADATA Synonym types #2450 -METADATA Ontology root terms annotation #2149 -METADATA Publications metadata #1671 -METADATA Ontology merging #1548 -METADATA Exemplar classes #899 -METADATA Ontology metadata requirements #1365 -STANDARDIZATION? Standardized xref prefixes in ontologies #525 -Proposals here: #482 (comment) -METADATA Modeling metaclasses #2454 (thanks @cthoyt, that's a good addition) -METADATA Standardizing how imported ontologies are noted #424 +METADATA Versioning term identifiers [#1347](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/1347) +METADATA Linking term to discussion on tracker [#1097](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/1097) +METADATA Language tags [#479](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/479) and [#325](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/325) +METADATA Synonym types [#2450](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/2450) +METADATA Ontology root terms annotation [#2149](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/2149) +METADATA Publications metadata [#1671](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/1671) +METADATA Ontology merging [#1548](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/1548) +METADATA Exemplar classes [#899](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/899) +METADATA Ontology metadata requirements [#1365](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/1365) +STANDARDIZATION? Standardized xref prefixes in ontologies [#525](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/525) +Proposals here: [#482](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/482) (comment) +METADATA Modeling metaclasses [#2454](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/2454) +METADATA Standardizing how imported ontologies are noted [#424](https://github.com/OBOFoundry/OBOFoundry.github.io/issues/424)