ui changes, fix FLIM image direction

Author: LAKESIDE\LindaT18

PythonGUI_apps/FLIM_analysis/FLIM_plot.py

@@ -50,7 +50,7 @@ def __init__(self):
 		self.ui.import_pkl_pushButton.clicked.connect(self.import_pkl_to_convert)
 		self.ui.pkl_to_h5_pushButton.clicked.connect(self.pkl_to_h5)
 		self.ui.analyze_lifetime_pushButton.clicked.connect(self.on_analyze_lifetime)
-		self.ui.analyze_spectrum_pushButton.clicked.connect(self.on_analyze_spectrum)
+		self.ui.analyze_psf_pushButton.clicked.connect(self.on_analyze_psf)
 
 		self.show()
 
@@ -139,7 +139,7 @@ def line_profile_update_plot(self):
 			except:
 				pass
 
-	def on_analyze_spectrum(self):
+	def on_analyze_psf(self):
 		self.spectrum_window = Spectra_plot_fit.MainWindow()
 		self.spectrum_window.show()
 		self.spectrum_window.opened_from_flim = True
@@ -234,10 +234,10 @@ def save_intensities_image(self):
 			filename_ext = os.path.basename(self.filename[0])
 			filename = os.path.splitext(filename_ext)[0] #get filename without extension
 			save_to = folder + "\\" + filename + "_intensity_sums.png"
-			cpm.plot_confocal(self.intensity_sums, stepsize=np.abs(self.pkl_file['Scan Parameters']['X step size (um)']))
+			cpm.plot_confocal(self.intensity_sums, FLIM_adjust=False, stepsize=np.abs(self.x_step_size))
 			plt.savefig(save_to, bbox_inches='tight', dpi=300)
-		except:
-			pass
+		except Exception as e:
+			print(format(e))
 
 	def save_intensities_array(self):
 		try:

PythonGUI_apps/FLIM_analysis/flim_plot_gui.ui

@@ -57,9 +57,9 @@
             </widget>
            </item>
            <item alignment="Qt::AlignLeft">
-            <widget class="QPushButton" name="analyze_spectrum_pushButton">
+            <widget class="QPushButton" name="analyze_psf_pushButton">
              <property name="text">
-              <string>Analyze spectrum</string>
+              <string>Analyze PSF</string>
              </property>
             </widget>
            </item>

PythonGUI_apps/Lifetime_analysis/Lifetime_analysis_gui_layout.ui

@@ -6,8 +6,8 @@
    <rect>
     <x>0</x>
     <y>0</y>
-    <width>1985</width>
-    <height>1470</height>
+    <width>1490</width>
+    <height>1201</height>
    </rect>
   </property>
   <property name="windowTitle">
@@ -1261,7 +1261,7 @@
     <rect>
      <x>0</x>
      <y>0</y>
-     <width>1985</width>
+     <width>1490</width>
      <height>31</height>
     </rect>
    </property>