Release 3.1.1

Author: egonw

CITATION.cff

@@ -2,8 +2,8 @@ cff-version: 1.2.0
 title: BridgeDb
 message: 'If you use this software, please cite it as below.'
 type: software
-version: 3.1.0
-date-released: '2023-11-05'
+version: 3.1.1
+date-released: '2023-12-18'
 authors:
   - given-names: Manas
     family-names: Awasthi

README.md

@@ -15,7 +15,7 @@ Using BridgeDb dependencies
 The [BridgeDb releases](https://github.com/bridgedb/BridgeDb/releases) are published to 
 [Maven Central](http://central.maven.org/maven2/org/bridgedb/), which means you can use the BridgeDb JARs without needing to compile BridgeDb.
 
-Usage depends on which module you require. The examples below assumes artifact `org.bridgedb.bio` and version `3.1.0`:
+Usage depends on which module you require. The examples below assumes artifact `org.bridgedb.bio` and version `3.1.1`:
 
 For [Maven](https://maven.apache.org/):
 
@@ -24,27 +24,27 @@ For [Maven](https://maven.apache.org/):
     <dependency>
         <groupId>org.bridgedb</groupId>
         <artifactId>org.bridgedb.bio</artifactId>
-        <version>3.1.0</version>
+        <version>3.1.1</version>
     </dependency>
 </dependencies>
 ```
 
 For [Gradle](https://gradle.org/):
 
 ```gradle
-compile group: 'org.bridgedb', name: 'org.bridgedb.bio', version: '3.1.0'
+compile group: 'org.bridgedb', name: 'org.bridgedb.bio', version: '3.1.1'
 ```
 
 For [Ivy](http://ant.apache.org/ivy/):
 
 ```xml
-<dependency org="org.bridgedb" name="org.bridgedb.bio" rev="3.1.0"/>
+<dependency org="org.bridgedb" name="org.bridgedb.bio" rev="3.1.1"/>
 ```
 
 For [Buildr](https://buildr.apache.org/):
 
 ```buildr
-'org.bridgedb:org.bridgedb.bio:jar:3.1.0'
+'org.bridgedb:org.bridgedb.bio:jar:3.1.1'
 ```
 
 
@@ -133,7 +133,7 @@ To make the release, run the following commands. Mind you, this requires you
 to have an approved Sonatype (http://oss.sonatype.org/) account with push rights:
 
 ```shell
-mvn versions:set -DnewVersion=3.1.0
+mvn versions:set -DnewVersion=3.1.2-SNAPSHOT
 mvn clean deploy
 ```
 

examples/pom.xml

@@ -3,7 +3,7 @@
   <parent>
     <artifactId>bridgedb-bundle</artifactId>
     <groupId>org.bridgedb</groupId>
-    <version>3.1.1-SNAPSHOT</version>
+    <version>3.1.1</version>
   </parent>
   <modelVersion>4.0.0</modelVersion>
   <groupId>org.bridgedb.examples</groupId>

org.bridgedb.bio/pom.xml

@@ -8,7 +8,7 @@
   <parent>
   	<artifactId>bridgedb-bundle</artifactId>
   	<groupId>org.bridgedb</groupId>
-  	<version>3.1.1-SNAPSHOT</version>
+  	<version>3.1.1</version>
   </parent>
 
 	<build>

org.bridgedb.file.orthoxml/pom.xml

@@ -6,7 +6,7 @@
   <parent>
   	<artifactId>bridgedb-bundle</artifactId>
   	<groupId>org.bridgedb</groupId>
-  	<version>3.1.1-SNAPSHOT</version>
+  	<version>3.1.1</version>
   </parent>
 
 	<build>

org.bridgedb.gui/pom.xml

@@ -7,7 +7,7 @@
   <parent>
   	<artifactId>bridgedb-bundle</artifactId>
   	<groupId>org.bridgedb</groupId>
-  	<version>3.1.1-SNAPSHOT</version>
+  	<version>3.1.1</version>
   </parent>
 
 	<build>

org.bridgedb.rdb.construct/pom.xml

@@ -7,7 +7,7 @@
   <parent>
   	<artifactId>bridgedb-bundle</artifactId>
   	<groupId>org.bridgedb</groupId>
-  	<version>3.1.1-SNAPSHOT</version>
+  	<version>3.1.1</version>
   </parent>
 
 	<build>

org.bridgedb.rdb/pom.xml

@@ -7,7 +7,7 @@
   <parent>
   	<artifactId>bridgedb-bundle</artifactId>
   	<groupId>org.bridgedb</groupId>
-  	<version>3.1.1-SNAPSHOT</version>
+  	<version>3.1.1</version>
   </parent>
 
 	<build>

org.bridgedb.rdf/pom.xml

@@ -6,7 +6,7 @@
   <parent>
   	<artifactId>bridgedb-bundle</artifactId>
   	<groupId>org.bridgedb</groupId>
-  	<version>3.1.1-SNAPSHOT</version>
+  	<version>3.1.1</version>
   </parent>
 
     <build>

org.bridgedb.sql/pom.xml

@@ -7,7 +7,7 @@
   <parent>
   	<artifactId>bridgedb-bundle</artifactId>
   	<groupId>org.bridgedb</groupId>
-  	<version>3.1.1-SNAPSHOT</version>
+  	<version>3.1.1</version>
   </parent>
 
         <build>