Skip to content

Commit cf3638f

Browse files
github-actions[bot]actions-user
github-actions[bot]
and
actions-user
authored
🚀 Automatically rebuilt derived files (OBOFoundry#2382)
Co-authored-by: GitHub Action <action@github.com>
1 parent dacc35a commit cf3638f

6 files changed

Lines changed: 1340 additions & 1343 deletions

File tree

‎_config.yml‎

Lines changed: 37 additions & 38 deletions
Original file line numberDiff line numberDiff line change
@@ -8004,44 +8004,6 @@ ontologies:
80048004
- disease
80058005
title: Sickle Cell Disease Ontology
80068006
tracker: https://github.com/scdodev/scdo-ontology/issues
8007-
- activity_status: orphaned
8008-
build:
8009-
method: obo2owl
8010-
source_url: http://variationontology.org/vario_download/vario.obo
8011-
contact:
8012-
email: mauno.vihinen@med.lu.se
8013-
github: maunov
8014-
label: Mauno Vihinen
8015-
orcid: 0000-0002-9614-7976
8016-
description: Variation Ontology, VariO, is an ontology for standardized, systematic
8017-
description of effects, consequences and mechanisms of variations.
8018-
domain: biological systems
8019-
homepage: http://variationontology.org
8020-
id: vario
8021-
layout: ontology_detail
8022-
license:
8023-
label: CC BY 4.0
8024-
logo: http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png
8025-
url: https://creativecommons.org/licenses/by/4.0/
8026-
ontology_purl: http://purl.obolibrary.org/obo/vario.owl
8027-
preferredPrefix: VariO
8028-
products:
8029-
- id: vario.owl
8030-
ontology_purl: http://purl.obolibrary.org/obo/vario.owl
8031-
title: VariO main release in OWL
8032-
- id: vario.obo
8033-
ontology_purl: http://purl.obolibrary.org/obo/vario.obo
8034-
title: VariO in OBO format
8035-
publications:
8036-
- id: https://www.ncbi.nlm.nih.gov/pubmed/24162187
8037-
title: Variation Ontology for annotation of variation effects and mechanisms
8038-
- id: https://www.ncbi.nlm.nih.gov/pubmed/24533660
8039-
title: 'Variation ontology: annotator guide'
8040-
- id: https://www.ncbi.nlm.nih.gov/pubmed/25616435
8041-
title: Types and effects of protein variations
8042-
repository: N/A
8043-
title: Variation Ontology
8044-
tracker: http://variationontology.org/instructions.shtml
80458007
- activity_status: orphaned
80468008
build:
80478009
infallible: 1
@@ -8131,6 +8093,43 @@ ontologies:
81318093
- behavior
81328094
title: Social Insect Behavior Ontology
81338095
tracker: https://github.com/obophenotype/sibo/issues
8096+
- activity_status: orphaned
8097+
build:
8098+
method: obo2owl
8099+
source_url: http://variationontology.org/vario_download/vario.obo
8100+
contact:
8101+
email: mauno.vihinen@med.lu.se
8102+
github: maunov
8103+
label: Mauno Vihinen
8104+
orcid: 0000-0002-9614-7976
8105+
description: Variation Ontology, VariO, is an ontology for standardized, systematic
8106+
description of effects, consequences and mechanisms of variations.
8107+
domain: biological systems
8108+
homepage: http://variationontology.org
8109+
id: vario
8110+
layout: ontology_detail
8111+
license:
8112+
label: CC BY 4.0
8113+
logo: http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png
8114+
url: https://creativecommons.org/licenses/by/4.0/
8115+
ontology_purl: http://purl.obolibrary.org/obo/vario.owl
8116+
preferredPrefix: VariO
8117+
products:
8118+
- id: vario.owl
8119+
ontology_purl: http://purl.obolibrary.org/obo/vario.owl
8120+
title: VariO main release in OWL
8121+
- id: vario.obo
8122+
ontology_purl: http://purl.obolibrary.org/obo/vario.obo
8123+
title: VariO in OBO format
8124+
publications:
8125+
- id: https://www.ncbi.nlm.nih.gov/pubmed/24162187
8126+
title: Variation Ontology for annotation of variation effects and mechanisms
8127+
- id: https://www.ncbi.nlm.nih.gov/pubmed/24533660
8128+
title: 'Variation ontology: annotator guide'
8129+
- id: https://www.ncbi.nlm.nih.gov/pubmed/25616435
8130+
title: Types and effects of protein variations
8131+
title: Variation Ontology
8132+
tracker: http://variationontology.org/instructions.shtml
81348133
- activity_status: inactive
81358134
contact:
81368135
email: carrine.blank@umontana.edu

‎registry/obo_prefixes.ttl‎

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -187,11 +187,11 @@
187187
,[ sh:prefix "KISAO" ; sh:namespace "http://purl.obolibrary.org/obo/KISAO_"]
188188
,[ sh:prefix "SBO" ; sh:namespace "http://purl.obolibrary.org/obo/SBO_"]
189189
,[ sh:prefix "SCDO" ; sh:namespace "http://purl.obolibrary.org/obo/SCDO_"]
190-
,[ sh:prefix "VariO" ; sh:namespace "http://purl.obolibrary.org/obo/VariO_"]
191190
,[ sh:prefix "FIX" ; sh:namespace "http://purl.obolibrary.org/obo/FIX_"]
192191
,[ sh:prefix "MAMO" ; sh:namespace "http://purl.obolibrary.org/obo/MAMO_"]
193192
,[ sh:prefix "REX" ; sh:namespace "http://purl.obolibrary.org/obo/REX_"]
194193
,[ sh:prefix "SIBO" ; sh:namespace "http://purl.obolibrary.org/obo/SIBO_"]
194+
,[ sh:prefix "VariO" ; sh:namespace "http://purl.obolibrary.org/obo/VariO_"]
195195
,[ sh:prefix "MICRO" ; sh:namespace "http://purl.obolibrary.org/obo/MICRO_"]
196196
,[ sh:prefix "AEO" ; sh:namespace "http://purl.obolibrary.org/obo/AEO_"]
197197
,[ sh:prefix "CEPH" ; sh:namespace "http://purl.obolibrary.org/obo/CEPH_"]

‎registry/ontologies.jsonld‎

Lines changed: 53 additions & 54 deletions
Original file line numberDiff line numberDiff line change
@@ -11269,60 +11269,6 @@
1126911269
"title": "Sickle Cell Disease Ontology",
1127011270
"tracker": "https://github.com/scdodev/scdo-ontology/issues"
1127111271
},
11272-
{
11273-
"activity_status": "orphaned",
11274-
"build": {
11275-
"method": "obo2owl",
11276-
"source_url": "http://variationontology.org/vario_download/vario.obo"
11277-
},
11278-
"contact": {
11279-
"email": "mauno.vihinen@med.lu.se",
11280-
"github": "maunov",
11281-
"label": "Mauno Vihinen",
11282-
"orcid": "0000-0002-9614-7976"
11283-
},
11284-
"description": "Variation Ontology, VariO, is an ontology for standardized, systematic description of effects, consequences and mechanisms of variations.",
11285-
"domain": "biological systems",
11286-
"homepage": "http://variationontology.org",
11287-
"id": "vario",
11288-
"layout": "ontology_detail",
11289-
"license": {
11290-
"label": "CC BY 4.0",
11291-
"logo": "http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png",
11292-
"url": "https://creativecommons.org/licenses/by/4.0/"
11293-
},
11294-
"ontology_purl": "http://purl.obolibrary.org/obo/vario.owl",
11295-
"preferredPrefix": "VariO",
11296-
"products": [
11297-
{
11298-
"id": "vario.owl",
11299-
"ontology_purl": "http://purl.obolibrary.org/obo/vario.owl",
11300-
"title": "VariO main release in OWL"
11301-
},
11302-
{
11303-
"id": "vario.obo",
11304-
"ontology_purl": "http://purl.obolibrary.org/obo/vario.obo",
11305-
"title": "VariO in OBO format"
11306-
}
11307-
],
11308-
"publications": [
11309-
{
11310-
"id": "https://www.ncbi.nlm.nih.gov/pubmed/24162187",
11311-
"title": "Variation Ontology for annotation of variation effects and mechanisms"
11312-
},
11313-
{
11314-
"id": "https://www.ncbi.nlm.nih.gov/pubmed/24533660",
11315-
"title": "Variation ontology: annotator guide"
11316-
},
11317-
{
11318-
"id": "https://www.ncbi.nlm.nih.gov/pubmed/25616435",
11319-
"title": "Types and effects of protein variations"
11320-
}
11321-
],
11322-
"repository": "N/A",
11323-
"title": "Variation Ontology",
11324-
"tracker": "http://variationontology.org/instructions.shtml"
11325-
},
1132611272
{
1132711273
"activity_status": "orphaned",
1132811274
"build": {
@@ -11442,6 +11388,59 @@
1144211388
"title": "Social Insect Behavior Ontology",
1144311389
"tracker": "https://github.com/obophenotype/sibo/issues"
1144411390
},
11391+
{
11392+
"activity_status": "orphaned",
11393+
"build": {
11394+
"method": "obo2owl",
11395+
"source_url": "http://variationontology.org/vario_download/vario.obo"
11396+
},
11397+
"contact": {
11398+
"email": "mauno.vihinen@med.lu.se",
11399+
"github": "maunov",
11400+
"label": "Mauno Vihinen",
11401+
"orcid": "0000-0002-9614-7976"
11402+
},
11403+
"description": "Variation Ontology, VariO, is an ontology for standardized, systematic description of effects, consequences and mechanisms of variations.",
11404+
"domain": "biological systems",
11405+
"homepage": "http://variationontology.org",
11406+
"id": "vario",
11407+
"layout": "ontology_detail",
11408+
"license": {
11409+
"label": "CC BY 4.0",
11410+
"logo": "http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png",
11411+
"url": "https://creativecommons.org/licenses/by/4.0/"
11412+
},
11413+
"ontology_purl": "http://purl.obolibrary.org/obo/vario.owl",
11414+
"preferredPrefix": "VariO",
11415+
"products": [
11416+
{
11417+
"id": "vario.owl",
11418+
"ontology_purl": "http://purl.obolibrary.org/obo/vario.owl",
11419+
"title": "VariO main release in OWL"
11420+
},
11421+
{
11422+
"id": "vario.obo",
11423+
"ontology_purl": "http://purl.obolibrary.org/obo/vario.obo",
11424+
"title": "VariO in OBO format"
11425+
}
11426+
],
11427+
"publications": [
11428+
{
11429+
"id": "https://www.ncbi.nlm.nih.gov/pubmed/24162187",
11430+
"title": "Variation Ontology for annotation of variation effects and mechanisms"
11431+
},
11432+
{
11433+
"id": "https://www.ncbi.nlm.nih.gov/pubmed/24533660",
11434+
"title": "Variation ontology: annotator guide"
11435+
},
11436+
{
11437+
"id": "https://www.ncbi.nlm.nih.gov/pubmed/25616435",
11438+
"title": "Types and effects of protein variations"
11439+
}
11440+
],
11441+
"title": "Variation Ontology",
11442+
"tracker": "http://variationontology.org/instructions.shtml"
11443+
},
1144511444
{
1144611445
"activity_status": "inactive",
1144711446
"contact": {

0 commit comments

Comments
 (0)