From 949448fda952e8720a10298324a3c5782719a493 Mon Sep 17 00:00:00 2001 From: Harsh16gupta Date: Thu, 4 Jun 2026 23:17:56 +0530 Subject: [PATCH] feat: add local vector cache and incremental note indexing --- package-lock.json | 950 +++++++++++++++++++++++++++++++++++- package.json | 3 +- src/commands/testEmbed.ts | 78 ++- src/pipeline/vectorCache.ts | 118 +++++ webpack.config.js | 17 + 5 files changed, 1135 insertions(+), 31 deletions(-) create mode 100644 src/pipeline/vectorCache.ts diff --git a/package-lock.json b/package-lock.json index 6ce5eaa..664cf80 100644 --- a/package-lock.json +++ b/package-lock.json @@ -10,7 +10,8 @@ "license": "MIT", "dependencies": { "@huggingface/transformers": "^3.8.1", - "js-tiktoken": "^1.0.21" + "js-tiktoken": "^1.0.21", + "vectra": "^0.12.3" }, "devDependencies": { "@types/node": "^18.7.13", @@ -766,6 +767,11 @@ "@jridgewell/sourcemap-codec": "^1.4.14" } }, + "node_modules/@mixmark-io/domino": { + "version": "2.2.0", + "resolved": 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"resolved": "https://registry.npmjs.org/yargs/-/yargs-17.7.2.tgz", + "integrity": "sha512-7dSzzRQ++CKnNI/krKnYRV7JKKPUXMEh61soaHKg9mrWEhzFWhFnxPxGl+69cD1Ou63C13NUPCnmIcrvqCuM6w==", + "dependencies": { + "cliui": "^8.0.1", + "escalade": "^3.1.1", + "get-caller-file": "^2.0.5", + "require-directory": "^2.1.1", + "string-width": "^4.2.3", + "y18n": "^5.0.5", + "yargs-parser": "^21.1.1" + }, + "engines": { + "node": ">=12" + } + }, + "node_modules/yargs-parser": { + "version": "21.1.1", + "resolved": "https://registry.npmjs.org/yargs-parser/-/yargs-parser-21.1.1.tgz", + "integrity": "sha512-tVpsJW7DdjecAiFpbIB1e3qxIQsE6NoPc5/eTdrbbIC4h0LVsWhnoa3g+m2HclBIujHzsxZ4VJVA+GUuc2/LBw==", + "engines": { + "node": ">=12" + } + }, "node_modules/yocto-queue": { "version": "0.1.0", "resolved": "https://registry.npmjs.org/yocto-queue/-/yocto-queue-0.1.0.tgz", diff --git a/package.json b/package.json index 16b1ead..0164100 100644 --- a/package.json +++ b/package.json @@ -37,6 +37,7 @@ }, "dependencies": { "@huggingface/transformers": "^3.8.1", - "js-tiktoken": "^1.0.21" + "js-tiktoken": "^1.0.21", + "vectra": "^0.12.3" } } diff --git a/src/commands/testEmbed.ts b/src/commands/testEmbed.ts index 3f4b8cb..0853a5a 100644 --- a/src/commands/testEmbed.ts +++ b/src/commands/testEmbed.ts @@ -4,6 +4,7 @@ import { NoteVector, WorkerMessage } from '../types/embed'; import { isGenericTitle } from '../utils/titleFilter'; import { log, logErr } from '../utils/logger'; import { getEncoding } from 'js-tiktoken'; +import { VectorCache } from '../pipeline/vectorCache'; // We use cl100k_base to approximate token counts for chunking. // The embedding model (all-MiniLM-L6-v2) uses a WordPiece tokenizer with a @@ -25,6 +26,20 @@ export const runTestEmbed = async (installDir: string) => { return; } + const cache = await VectorCache.create(); + + // Handle deletions: Remove notes from index that are no longer in Joplin + const indexedIds = await cache.getIndexedIds(); + const joplinNoteIds = new Set(notes.map((n) => n.id)); + const idsToDelete = indexedIds.filter((id) => !joplinNoteIds.has(id)); + + if (idsToDelete.length > 0) { + log(`Removing ${idsToDelete.length} obsolete notes from cache`); + await cache.deleteItems(idsToDelete); + } + + await cache.beginUpdate(); + const worker = new Worker(`${installDir}/worker/embedWorker.js`); let currentNoteIndex = 0; let currentChunkIndex = 0; @@ -34,11 +49,13 @@ export const runTestEmbed = async (installDir: string) => { let isEmbeddingTitle = false; let totalInferenceTime = 0; let skippedCount = 0; + let cachedCount = 0; const batchStartTime = performance.now(); const noteVectors: NoteVector[] = []; worker.onerror = (err: ErrorEvent) => { logErr('Worker error:', err.message); + cache.cancelUpdate(); worker.terminate(); }; @@ -54,25 +71,36 @@ export const runTestEmbed = async (installDir: string) => { return chunks; }; - const finalizeNote = (vector: number[], titleWeight: number) => { + const finalizeNote = async (vector: number[], titleWeight: number, hash: string) => { const note = notes[currentNoteIndex]; noteVectors.push({ noteId: note.id, title: note.title, vector, titleWeight }); const norm = Math.sqrt(vector.reduce((s, v) => s + v * v, 0)); log(` → final vector: dim=${vector.length}, titleWeight=${titleWeight.toFixed(3)}, norm=${norm.toFixed(4)}`); + + await cache.upsertItem(note.id, vector, { + title: note.title, + hash, + updatedTime: note.updated_time, + titleWeight, + }); + currentNoteIndex++; - processNextNote(); + await processNextNote(); }; - const processNextNote = () => { + let currentNoteHash = ''; + + const processNextNote = async () => { currentChunkIndex = 0; currentNoteChunks = []; currentChunkEmbeddings = []; currentBodyVector = []; isEmbeddingTitle = false; - // Skip notes with empty body and generic title — no semantic content to embed + // Skip notes with empty body and generic title, and bypass cached notes while (currentNoteIndex < notes.length) { const note = notes[currentNoteIndex]; + if (note.body.length === 0 && isGenericTitle(note.title)) { log( `[${currentNoteIndex + 1}/${notes.length}] skipped "${note.title.slice(0, 30)}" (empty body, generic title)`, @@ -81,6 +109,23 @@ export const runTestEmbed = async (installDir: string) => { currentNoteIndex++; continue; } + + currentNoteHash = cache.computeHash(note.title, note.body); + const cachedItem = await cache.getItem(note.id); + + if (cachedItem && cachedItem.metadata.hash === currentNoteHash) { + log(`[${currentNoteIndex + 1}/${notes.length}] cache hit for "${note.title.slice(0, 30)}"`); + noteVectors.push({ + noteId: note.id, + title: note.title, + vector: cachedItem.vector, + titleWeight: cachedItem.metadata.titleWeight ?? 0, + }); + cachedCount++; + currentNoteIndex++; + continue; + } + break; } @@ -89,11 +134,15 @@ export const runTestEmbed = async (installDir: string) => { log(`-------------------------------------------`); log(`Batch execution complete!`); log(`Total notes processed: ${notes.length}`); - log(`Notes embedded: ${noteVectors.length}`); + log(`Notes embedded: ${noteVectors.length - cachedCount}`); + log(`Notes loaded from cache: ${cachedCount}`); log(`Notes skipped: ${skippedCount}`); log(`Sum of inference times: ${Math.round(totalInferenceTime)}ms`); log(`Real total batch time (including worker message passing): ${Math.round(totalTime)}ms`); log(`-------------------------------------------`); + + await cache.endUpdate(); + worker.terminate(); log('Worker terminated. Test complete.'); return; @@ -116,7 +165,7 @@ export const runTestEmbed = async (installDir: string) => { } }; - worker.onmessage = (event: MessageEvent) => { + worker.onmessage = async (event: MessageEvent) => { const data = event.data; if (data.type === 'load-result') { @@ -128,9 +177,10 @@ export const runTestEmbed = async (installDir: string) => { ` Worker WebGPU diagnostics - gpu in navigator: ${data.workerGpuExists}, env.IS_WEBGPU_AVAILABLE: ${data.isWebGpuAvailable}`, ); log(`Starting sequential embedding of ${notes.length} notes with chunking...`); - processNextNote(); + await processNextNote(); } else { logErr('Model load failed:', data.error); + cache.cancelUpdate(); worker.terminate(); } return; @@ -139,16 +189,10 @@ export const runTestEmbed = async (installDir: string) => { if (data.type === 'embed-result') { const note = notes[currentNoteIndex]; - if (data.noteId !== note.id) { - logErr(`Error: Received out-of-order worker result. Expected noteId: ${note.id}, got: ${data.noteId}`); - worker.terminate(); - return; - } - if (!data.success) { logErr(`Failed to embed note "${note.title.slice(0, 30)}":`, data.error); currentNoteIndex++; - processNextNote(); + await processNextNote(); return; } @@ -165,13 +209,13 @@ export const runTestEmbed = async (installDir: string) => { log( ` → title embedded in ${Math.round(data.inferenceTime)}ms, sim=${sim.toFixed(3)}, weight=${alpha.toFixed(3)}`, ); - finalizeNote(finalVector, alpha); + await finalizeNote(finalVector, alpha, currentNoteHash); } else { // Empty body, descriptive title → title is the entire vector log( `[${currentNoteIndex + 1}/${notes.length}] embedded title of "${note.title.slice(0, 30)}" in ${Math.round(data.inferenceTime)}ms (no body)`, ); - finalizeNote(titleEmbedding, 1.0); + await finalizeNote(titleEmbedding, 1.0, currentNoteHash); } } else { // Body chunk result @@ -198,7 +242,7 @@ export const runTestEmbed = async (installDir: string) => { worker.postMessage({ type: 'embed', text: note.title, noteId: note.id }); } else { // Generic title → body vector is the final vector - finalizeNote(currentBodyVector, 0); + await finalizeNote(currentBodyVector, 0, currentNoteHash); } } } diff --git a/src/pipeline/vectorCache.ts b/src/pipeline/vectorCache.ts new file mode 100644 index 0000000..f84614d --- /dev/null +++ b/src/pipeline/vectorCache.ts @@ -0,0 +1,118 @@ +import joplin from 'api'; +import { LocalIndex, MetadataTypes } from 'vectra'; +import * as path from 'path'; +import * as crypto from 'crypto'; +import { log } from '../utils/logger'; + +export interface CacheMetadata { + title: string; + hash: string; + updatedTime: number; + titleWeight: number; + [key: string]: MetadataTypes; +} + +export class VectorCache { + private index: LocalIndex; + + constructor(private dbPath: string) { + this.index = new LocalIndex(dbPath); + } + + /** + * Factory method to initialize the cache service. + * Resolves Joplin's data directory and configures the Vectra LocalIndex. + */ + public static async create(): Promise { + const dataDir = await joplin.plugins.dataDir(); + const dbPath = path.join(dataDir, 'vector_index'); + const cache = new VectorCache(dbPath); + await cache.init(); + return cache; + } + + /** + * Initializes the database structure if it does not exist. + */ + private async init(): Promise { + if (!(await this.index.isIndexCreated())) { + log('Initializing local vector index at:', this.dbPath); + await this.index.createIndex(); + } + } + + /** + * Computes a unique SHA-256 hash of the note content (title + body). + */ + public computeHash(title: string, body: string): string { + return crypto + .createHash('sha256') + .update(title + '\n\n' + body, 'utf8') + .digest('hex'); + } + + /** + * Retrieves an item by its ID from the cache. + */ + public async getItem(id: string) { + try { + return await this.index.getItem(id); + } catch (err) { + log('Error getting cached item:', err); + return undefined; + } + } + + /** + * Inserts or updates an item in the cache. + */ + public async upsertItem(id: string, vector: number[], metadata: CacheMetadata) { + return await this.index.upsertItem({ + id, + vector, + metadata, + }); + } + + /** + * Starts a batch update transaction. + */ + public async beginUpdate() { + await this.index.beginUpdate(); + } + + /** + * Commits the batch update transaction to disk. + */ + public async endUpdate() { + await this.index.endUpdate(); + } + + /** + * Aborts a batch update transaction. + */ + public cancelUpdate() { + this.index.cancelUpdate(); + } + + /** + * Deletes multiple items from the cache. + */ + public async deleteItems(ids: string[]) { + if (ids.length > 0) { + await this.beginUpdate(); + for (const id of ids) { + await this.index.deleteItem(id); + } + await this.endUpdate(); + } + } + + /** + * Returns all indexed item IDs. + */ + public async getIndexedIds(): Promise { + const items = await this.index.listItems(); + return items.map((item) => item.id); + } +} diff --git a/webpack.config.js b/webpack.config.js index f222f04..3bd23f2 100644 --- a/webpack.config.js +++ b/webpack.config.js @@ -185,6 +185,18 @@ const baseConfig = { }, ], }, + // vectra's barrel export (lib/index.js) re-exports LocalEmbeddings and + // TransformersEmbeddings, which contain require('@huggingface/transformers'). + // Webpack follows these statically even though we never call those classes. + // @huggingface/transformers in turn pulls in onnxruntime-node with native + // .node binaries that Webpack cannot parse. Marking both as externals + // prevents Webpack from traversing into them. The deep import path + // (vectra/lib/LocalIndex) is blocked by vectra's package.json exports field, + // so this is the only viable workaround. + externals: { + 'onnxruntime-node': 'commonjs onnxruntime-node', + '@huggingface/transformers': 'commonjs @huggingface/transformers', + }, ...userConfig.webpackOverrides, }; @@ -264,10 +276,15 @@ const extraScriptConfig = { const createArchiveConfig = { stats: 'errors-only', + target: 'node', entry: './dist/index.js', resolve: { fallback: moduleFallback, }, + externals: { + 'onnxruntime-node': 'commonjs onnxruntime-node', + '@huggingface/transformers': 'commonjs @huggingface/transformers', + }, output: { filename: 'index.js', path: publishDir,