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_data/WP5635-bibliography.tsv

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ID Database Citation
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18481082 Pubmed "Expression and evolutionary features of the hexokinase gene family in Arabidopsis. Karve A, Rauh BL, Xia X, Kandasamy M, Meagher RB, Sheen J, et al. Planta. 2008 Aug;228(3):411–25. <a href=""http://www.ncbi.nlm.nih.gov/pubmed/18481082"" target=""_blank"" class=""external"" rel=""nofollow"">PubMed</a> <a href=""https://europepmc.org/abstract/MED/18481082"" target=""_blank"" class=""external"" rel=""nofollow"">Europe PMC</a> <a href=""https://scholia.toolforge.org/pubmed/18481082"" target=""_blank"" class=""external"" rel=""nofollow"">Scholia</a>"

_data/WP5635-datanodes.tsv

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Label Type Identifier Comment Ensembl NCBI gene HGNC UniProt Wikidata ChEBI InChI PubChem ChemSpider HMDB KEGG LipidMaps
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glucose 1-phosphate Metabolite hmdb:HMDB0001586 "" chebi:29042 inchikey:HXXFSFRBOHSIMQ-VFUOTHLCSA-N pubchem.compound:65533 chemspider:58977 hmdb:HMDB0001586 kegg.compound:C00103
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ADP-glucose Metabolite hmdb:HMDB0006557 "" chebi:15751 inchikey:WFPZSXYXPSUOPY-ROYWQJLOSA-N pubchem.compound:16500 chemspider:15642 hmdb:HMDB0006557 kegg.compound:C00498
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starch Metabolite kegg.compound:C00369 "" wikidata:Q41534 chebi:28017 kegg.compound:C00369
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glucose 6-phosphate Metabolite hmdb:HMDB0001401 "" chebi:4170 inchikey:NBSCHQHZLSJFNQ-GASJEMHNSA-N pubchem.compound:5958 chemspider:5743 hmdb:HMDB0001401 kegg.compound:C00092
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Pi Metabolite chebi:18367 "" wikidata:Q177811 chebi:18367 inchikey:NBIIXXVUZAFLBC-UHFFFAOYSA-K pubchem.compound:1061 chemspider:1032
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fructose 1,6-bisphosphate Metabolite hmdb:HMDB0001058 "" chebi:28013 inchikey:RNBGYGVWRKECFJ-ARQDHWQXSA-N pubchem.compound:10267 chemspider:9848 hmdb:HMDB0001058 kegg.compound:C05378
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fructose 6-phosphate Metabolite hmdb:HMDB0000124 "" chebi:15946 inchikey:GSXOAOHZAIYLCY-HSUXUTPPSA-N pubchem.compound:69507 chemspider:62713 hmdb:HMDB0000124 kegg.compound:C00085
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H₂O Metabolite hmdb:HMDB0002111 "" chebi:15377 inchikey:XLYOFNOQVPJJNP-UHFFFAOYSA-N pubchem.compound:962 chemspider:937 hmdb:HMDB0002111 kegg.compound:C00001
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ATP Metabolite hmdb:HMDB0000538 "" chebi:15422 inchikey:ZKHQWZAMYRWXGA-KQYNXXCUSA-N pubchem.compound:5957 chemspider:5742 hmdb:HMDB0000538 kegg.compound:C00002
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PPi Metabolite chebi:35782 "" wikidata:Q55506572 chebi:35782 inchikey:OTLZRRUHHNDQIU-UHFFFAOYSA-N pubchem.compound:21159150 chemspider:20120165 hmdb:HMDB0039929
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ADP Metabolite kegg.compound:C00008 "" wikidata:Q185253 chebi:16761 inchikey:XTWYTFMLZFPYCI-KQYNXXCUSA-N pubchem.compound:6022 chemspider:5800 hmdb:HMDB0001341 kegg.compound:C00008
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PHS1 Protein ensembl:Os03g0758100 ""
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PGI1 Protein ensembl:Os09g0465600 ""
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PGMP Protein ensembl:Os10g0189100 ""
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FBP Protein ensembl:Os03g0267300 ""
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SS1 Protein ensembl:Os06g0160700 ""
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SS2 Protein ensembl:Os10g0437600 ""
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SS3 Protein ensembl:Os08g0191433 ""
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APL2 Protein ensembl:Os07g0243200 ""
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APL3 Protein ensembl:Os01g0633100 ""
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ADG2 Protein ensembl:Os03g0735000 ""
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APS1 Protein ensembl:Os09g0298200 ""

_pathways/WP5635.md

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---
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annotations:
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- id: PW:0001390
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parent: classic metabolic pathway
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type: Pathway Ontology
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value: starch biosynthetic pathway
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authors:
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- Oec
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citedin: ''
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communities: []
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description: 'This pathways describes the synthesis and degradation reactions of starch
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in the chloroplast.The metabolic link with the Calvin-Benson Cycle, Sucrose Metabolism
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and Glycolysis are indicated. The original pathway (http://wikipathways.org/pathways/WP2622.html)
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was lifted into Oryza sativa. '
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last-edited: 2026-03-30
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ndex: null
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organisms:
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- Oryza sativa
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redirect_from:
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- /index.php/Pathway:WP5635
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- /instance/WP5635
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- /instance/WP5635_r142566
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revision: r142566
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schema-jsonld:
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- '@context': https://schema.org/
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'@id': https://wikipathways.github.io/pathways/WP5635.html
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'@type': Dataset
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creator:
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'@type': Organization
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name: WikiPathways
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description: 'This pathways describes the synthesis and degradation reactions of
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starch in the chloroplast.The metabolic link with the Calvin-Benson Cycle, Sucrose
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Metabolism and Glycolysis are indicated. The original pathway (http://wikipathways.org/pathways/WP2622.html)
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was lifted into Oryza sativa. '
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keywords:
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- ADG2
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- ADP
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- ADP-glucose
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- APL2
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- APL3
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- APS1
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- ATP
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- FBP
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- H₂O
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- PGI1
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- PGMP
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- PHS1
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- PPi
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- Pi
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- SS1
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- SS2
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- SS3
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- fructose 1,6-bisphosphate
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- fructose 6-phosphate
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- glucose 1-phosphate
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- glucose 6-phosphate
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- starch
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license: CC0
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name: Starch metabolism
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seo: CreativeWork
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title: Starch metabolism
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wpid: WP5635
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---

assets/img/WP5635/WP5635-thumb.png

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