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EBISPOT

EMBL-EBI Samples, Phenotypes, and Ontologies Team

59 followers
https://www.ebi.ac.uk/spot/

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efo efo Public

Github repo for the Experimental Factor Ontology (EFO)

Python 63 15
DUO DUO Public

Ontology for consent codes and data use requirements

Makefile 68 17
CMPO CMPO Public

Cellular Microscopy Phenotype Ontology

Python 6 2
ols4 ols4 Public

The EMBL-EBI Ontology Lookup Service (OLS)

Java 88 40

Repositories

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All CSS Dockerfile HTML Java JavaScript Jinja Jupyter Notebook Makefile Python Ruby Shell TeX TypeScript Web Ontology Language

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Showing 10 of 106 repositories

ols4 Public
The EMBL-EBI Ontology Lookup Service (OLS)

EBISPOT/ols4’s past year of commit activity

Java 88 Apache-2.0 40 84 (1 issue needs help) 14 Updated May 12, 2026
gwasdepo-commons Public

EBISPOT/gwasdepo-commons’s past year of commit activity

Java 0 Apache-2.0 0 1 0 Updated May 12, 2026
gwas-curation-service Public

EBISPOT/gwas-curation-service’s past year of commit activity

Java 0 0 11 2 Updated May 12, 2026
gwas-utils Public
Collection of tools and scripts to manage GWAS Catalog related infrastructure.

EBISPOT/gwas-utils’s past year of commit activity

Python 6 3 10 3 Updated May 11, 2026
efo Public
Github repo for the Experimental Factor Ontology (EFO)

EBISPOT/efo’s past year of commit activity

Python 63 15 201 (2 issues need help) 12 Updated May 11, 2026
oxo2 Public
A SSSOM compliant implementation of OxO that is backwards compatible with OxO version 1

EBISPOT/oxo2’s past year of commit activity

Java 1 Apache-2.0 0 0 0 Updated May 9, 2026
zooma2 Public

EBISPOT/zooma2’s past year of commit activity

Java 0 Apache-2.0 0 0 0 Updated May 8, 2026
efo-llm-assessment Public Forked from EBISPOT/efo
Github repo for testing the LLM capabilities to edit the Experimental Factor Ontology (EFO)

EBISPOT/efo-llm-assessment’s past year of commit activity

Makefile 0 18 0 3 Updated May 7, 2026
gwas-ui Public

EBISPOT/gwas-ui’s past year of commit activity

JavaScript 5 Apache-2.0 3 19 5 Updated May 7, 2026
SumStats Public
Summary statistics with HDF5

EBISPOT/SumStats’s past year of commit activity

Python 6 2 3 9 Updated May 7, 2026

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