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40 changes: 40 additions & 0 deletions _config.yml
Original file line number Diff line number Diff line change
Expand Up @@ -5485,6 +5485,43 @@ ontologies:
title: Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources
type: annotation
user: https://hpo.jax.org/app/
- activity_status: active
browsers:
- label: BioPortal
title: BioPortal Ontology Browser
url: https://bioportal.bioontology.org/ontologies/pbpko
contact:
email: saurav.kumar@iispv.cat
github: Crispae
label: Saurav Kumar
orcid: 0000-0003-0593-2598
description: An ontology for modeling and understanding of pharmacokinetics in biological
systems.
domain: chemistry and biochemistry
homepage: https://github.com/InSilicoVida-Research-Lab/pbpko
id: pbpko
in_foundry_order: 1
layout: ontology_detail
license:
label: CC BY 3.0
logo: http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png
url: http://creativecommons.org/licenses/by/3.0/
ontology_purl: http://purl.obolibrary.org/obo/pbpko.owl
preferredPrefix: PBPKO
products:
- id: pbpko.owl
ontology_purl: http://purl.obolibrary.org/obo/pbpko.owl
- id: pbpko.obo
ontology_purl: http://purl.obolibrary.org/obo/pbpko.obo
- id: pbpko.json
ontology_purl: http://purl.obolibrary.org/obo/pbpko.json
repository: https://github.com/InSilicoVida-Research-Lab/pbpko
title: Physiologically-Based Pharmacokinetic Ontology
tracker: https://github.com/InSilicoVida-Research-Lab/pbpko/issues
usages:
- description: PBPKO is used for annotation of kinetic model in SBML description
format.
user: https://github.com/InSilicoVida-Research-Lab
- activity_status: active
contact:
email: davidos@ebi.ac.uk
Expand Down Expand Up @@ -9790,6 +9827,9 @@ principles:
- id: fp-013-notification
layout: principle
title: Notification of Changes (principle 13)
- id: fp-014-guidelines
layout: principle
title: Guidelines (principle 14)
- id: fp-016-maintenance
layout: principle
title: Maintenance (principle 16)
Expand Down
3 changes: 3 additions & 0 deletions principles/all.yml
Original file line number Diff line number Diff line change
Expand Up @@ -41,6 +41,9 @@ principles:
- id: fp-013-notification
layout: principle
title: Notification of Changes (principle 13)
- id: fp-014-guidelines
layout: principle
title: Guidelines (principle 14)
- id: fp-016-maintenance
layout: principle
title: Maintenance (principle 16)
Expand Down
4 changes: 4 additions & 0 deletions registry/obo_context.jsonld
Original file line number Diff line number Diff line change
Expand Up @@ -748,6 +748,10 @@
"@id": "http://purl.obolibrary.org/obo/PATO_",
"@prefix": true
},
"PBPKO": {
"@id": "http://purl.obolibrary.org/obo/PBPKO_",
"@prefix": true
},
"PCL": {
"@id": "http://purl.obolibrary.org/obo/PCL_",
"@prefix": true
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1 change: 1 addition & 0 deletions registry/obo_prefixes.ttl
Original file line number Diff line number Diff line change
Expand Up @@ -133,6 +133,7 @@
,[ sh:prefix "ORNASEQ" ; sh:namespace "http://purl.obolibrary.org/obo/ORNASEQ_"]
,[ sh:prefix "OVAE" ; sh:namespace "http://purl.obolibrary.org/obo/OVAE_"]
,[ sh:prefix "PATO" ; sh:namespace "http://purl.obolibrary.org/obo/PATO_"]
,[ sh:prefix "PBPKO" ; sh:namespace "http://purl.obolibrary.org/obo/PBPKO_"]
,[ sh:prefix "PCL" ; sh:namespace "http://purl.obolibrary.org/obo/PCL_"]
,[ sh:prefix "PCO" ; sh:namespace "http://purl.obolibrary.org/obo/PCO_"]
,[ sh:prefix "PDRO" ; sh:namespace "http://purl.obolibrary.org/obo/PDRO_"]
Expand Down
52 changes: 52 additions & 0 deletions registry/ontologies.jsonld
Original file line number Diff line number Diff line change
Expand Up @@ -7613,6 +7613,58 @@
}
]
},
{
"activity_status": "active",
"browsers": [
{
"label": "BioPortal",
"title": "BioPortal Ontology Browser",
"url": "https://bioportal.bioontology.org/ontologies/pbpko"
}
],
"contact": {
"email": "saurav.kumar@iispv.cat",
"github": "Crispae",
"label": "Saurav Kumar",
"orcid": "0000-0003-0593-2598"
},
"description": "An ontology for modeling and understanding of pharmacokinetics in biological systems.",
"domain": "chemistry and biochemistry",
"homepage": "https://github.com/InSilicoVida-Research-Lab/pbpko",
"id": "pbpko",
"in_foundry_order": 1,
"layout": "ontology_detail",
"license": {
"label": "CC BY 3.0",
"logo": "http://mirrors.creativecommons.org/presskit/buttons/80x15/png/by.png",
"url": "http://creativecommons.org/licenses/by/3.0/"
},
"ontology_purl": "http://purl.obolibrary.org/obo/pbpko.owl",
"preferredPrefix": "PBPKO",
"products": [
{
"id": "pbpko.owl",
"ontology_purl": "http://purl.obolibrary.org/obo/pbpko.owl"
},
{
"id": "pbpko.obo",
"ontology_purl": "http://purl.obolibrary.org/obo/pbpko.obo"
},
{
"id": "pbpko.json",
"ontology_purl": "http://purl.obolibrary.org/obo/pbpko.json"
}
],
"repository": "https://github.com/InSilicoVida-Research-Lab/pbpko",
"title": "Physiologically-Based Pharmacokinetic Ontology",
"tracker": "https://github.com/InSilicoVida-Research-Lab/pbpko/issues",
"usages": [
{
"description": "PBPKO is used for annotation of kinetic model in SBML description format.",
"user": "https://github.com/InSilicoVida-Research-Lab"
}
]
},
{
"activity_status": "active",
"contact": {
Expand Down
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