Issues

• add --outMultimapperOrder Random --outSAMmultNmax 1 to aligner options for STAR in mRNAseq workflow

  maxplanck-ie/BigRedButton#119 · Filter by author katsikora opened on May 13, 2026

• Add new functionality for Universal 3' and 5' Multiplex Gene Expression - cellranger multi

  maxplanck-ie/BigRedButton#118 · Filter by author gerikson opened on Feb 12, 2026

• Add small RNA-Seq analysis to BRB

  maxplanck-ie/BigRedButton#117 · Filter by author gerikson opened on Jan 19, 2026

• cellranger count errors out as dm6 is passed to -transcriptome

  maxplanck-ie/BigRedButton#110 · Filter by author katsikora opened on May 28, 2025
  10

• deal with multiple multiqc reports for the same project

  maxplanck-ie/BigRedButton#109 · Filter by author katsikora opened on May 28, 2025

• multiqc_data group

  question
  maxplanck-ie/BigRedButton#100 · Filter by author thomasmanke opened on Oct 31, 2024
  2

  

• ET.py check file existence

  maxplanck-ie/BigRedButton#97 · Filter by author thomasmanke opened on Oct 27, 2024
  3

• Stats upload without a full re-run

  maxplanck-ie/BigRedButton#89 · Filter by author WardDeb opened on Aug 20, 2024