Issues

• Jupyter result-window guards read titles before presentation acknowledgement

  bugcomponent:molsysviewer
  uibcdf/molsysmt#609 · Filter by author dprada opened on Nov 6, 2026

• Near-zero periodic origins are snapped using application-dependent units

  bugcomponent:molsysviewer
  uibcdf/molsysmt#608 · Filter by author dprada opened on Nov 6, 2026

• Periodic wrapping uses Cartesian diagonal paths for rotated orthogonal row-vector boxes

  bugcomponent:molsysviewer
  uibcdf/molsysmt#607 · Filter by author dprada opened on Nov 6, 2026

• Temporal unwrap reuses the first box classification after later cells become triclinic

  bugcomponent:molsysviewer
  uibcdf/molsysmt#606 · Filter by author dprada opened on Nov 6, 2026

• Box factory accepts degenerate dimensions and returns nonfinite cells for incompatible angles

  bugcomponent:molsysviewer
  uibcdf/molsysmt#605 · Filter by author dprada opened on Nov 6, 2026

• Provide supported bounded pairwise pose RMSD and geometric clustering

  component:dockingmtproposal
  uibcdf/molsysmt#604 · Filter by author LMMV opened on Nov 6, 2026

• Molecular task panels lose rejected-operation diagnostics during automatic synchronization refresh

  bugcomponent:molsysviewer
  uibcdf/molsysmt#603 · Filter by author dprada opened on Nov 6, 2026

• Provide a public axis-angle rotation constructor for molecular consumers

  component:molsysviewerenhancement
  uibcdf/molsysmt#602 · Filter by author dprada opened on Nov 6, 2026

• Preserve adapter-load causes in molecular-system validation

  component:peptidemt
  uibcdf/molsysmt#601 · Filter by author LMMV opened on Nov 6, 2026

• mmCIF native conversion drops deposited model labels despite declared structure_id support

  attributebugform
  uibcdf/molsysmt#600 · Filter by author dprada opened on Nov 6, 2026

• Provide a source-preserving prepared-PDBQT conformation projection for rescoring

  component:dockingmtproposal
  uibcdf/molsysmt#599 · Filter by author LMMV opened on Nov 6, 2026
  1

• NGLView empty-workspace tests leave links referencing closed widgets

  basicbugtests
  uibcdf/molsysmt#598 · Filter by author dprada opened on Nov 6, 2026

• Generated CCD reader tests leak miniature amino-acid catalogues across tests

  bugdatatests
  uibcdf/molsysmt#597 · Filter by author dprada opened on Nov 6, 2026

• GRO source naming declarations arrive after connectivity inference

  bugconvertform
  uibcdf/molsysmt#596 · Filter by author dprada opened on Nov 6, 2026

• mmCIF model merging mistakes inequality requests for ignored labels

  bugconvertform
  uibcdf/molsysmt#595 · Filter by author dprada opened on Nov 6, 2026

• Importing the group classifier module replaces its public callable export

  apibugtests
  uibcdf/molsysmt#594 · Filter by author dprada opened on Nov 6, 2026

• Alzheimer capstone preparation uses unsupported builder keywords and drops independent repairs

  bugbuilddocs
  uibcdf/molsysmt#593 · Filter by author dprada opened on Nov 6, 2026

• Define faithful OpenMM runtime and State snapshot copy contracts

  apidocsformproposaltests
  uibcdf/molsysmt#592 · Filter by author dprada opened on Nov 6, 2026

• Molecular tools review summary inherits incompatible Jupyter definition-list floats

  bugcomponent:molsysviewermolsysviewer
  uibcdf/molsysmt#591 · Filter by author dprada opened on Nov 6, 2026

• Molecular tools loses the completed-removal outcome during automatic panel refresh

  bugcomponent:molsysviewermolsysviewer
  uibcdf/molsysmt#590 · Filter by author dprada opened on Nov 6, 2026

• Devguide board reconciliation falsely loses issues older than its 500-item limit

  bugcomponent:molsysviewerdocspartial
  uibcdf/molsysmt#587 · Filter by author dprada opened on Nov 6, 2026

• Design a selective, versioned structural fixture corpus for generative-model interoperability tests

  uibcdf/molsysmt#586 · Filter by author dprada opened on Nov 6, 2026

• Evaluate RFD4 annotated-CIF interoperability with chemically faithful MolSys representations

  uibcdf/molsysmt#585 · Filter by author dprada opened on Nov 6, 2026

• Expose effective engine-neutral mechanics recipes and unsupported stored controls

  apicomponent:molsysviewerconvertenhancement
  uibcdf/molsysmt#582 · Filter by author dprada opened on Nov 6, 2026

• Expose public protonation-removal correspondence for managed consumers

  component:molsysviewerproposal
  uibcdf/molsysmt#576 · Filter by author dprada opened on Nov 5, 2026