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Use zarr3 and unpin dask#486

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keller-mark merged 16 commits into
vitessce:mainfrom
LucaMarconato:zarr3
May 27, 2026
Merged

Use zarr3 and unpin dask#486
keller-mark merged 16 commits into
vitessce:mainfrom
LucaMarconato:zarr3

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@LucaMarconato
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Required if vitessce/easy_vitessce#49 will be merged

@keller-mark
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Thanks, I will need to check all of the places that zarr is used to see if there is any usage of APIs that changed between v2 and v3 package versions

Unfortunately it also looks like the requires-python version will need to be bumped in order to add these dependencies. I guess it is due to the discrepancy between Scientific Python and overall Python. It looks like Google Colab and HuBMAP Workspaces notebooks both support 3.12 now so should be ok to bump.

@keller-mark
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Fixes #481
Fixes #468
Fixes #493
Fixes #502

@keller-mark keller-mark merged commit 624db76 into vitessce:main May 27, 2026
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