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Add pbpko.md#2848

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deepakunni3 merged 7 commits intoOBOFoundry:masterfrom
Crispae:master
Feb 19, 2026
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Add pbpko.md#2848
deepakunni3 merged 7 commits intoOBOFoundry:masterfrom
Crispae:master

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@Crispae Crispae commented Feb 12, 2026

pbpko.md file added for the new accepted PBPKO ontology
#2563

Added detailed metadata for the Physiologically-Based Pharmacokinetic Ontology including contact information, description, and repository links.
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Crispae commented Feb 18, 2026

Removed the trailing space, causing issue in automated checks.

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deepakunni3 commented Feb 18, 2026

@Crispae It looks like you have Kinetics for the 'domain' field.

Currently, the allowed values for this field is 'upper', 'anatomy and development', 'health', 'phenotype', 'investigations', 'environment', 'chemistry and biochemistry', 'microbiology', 'agriculture', 'diet, metabolomics, and nutrition', 'biological systems', 'information technology', 'organisms', 'information', and 'simulation'.

Perhaps chemistry and biochemistry would be a better replacement for Kinetics?

Updated domain from 'Kinetics' to 'chemistry and biochemistry'.
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Crispae commented Feb 18, 2026

@Crispae It looks like you have Kinetics for the 'domain' field.

Currently, the allowed values for this field is 'upper', 'anatomy and development', 'health', 'phenotype', 'investigations', 'environment', 'chemistry and biochemistry', 'microbiology', 'agriculture', 'diet, metabolomics, and nutrition', 'biological systems', 'information technology', 'organisms', 'information', and 'simulation'.

Perhaps chemistry and biochemistry would be a better replacement for Kinetics?

@deepakunni3 Thanks for prompt response, I have updated the domain as you have suggested.

@deepakunni3 deepakunni3 self-requested a review February 19, 2026 14:53
Comment thread ontology/pbpko.md
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Thank you @Crispae for resolving existing issues.
Looks good to merge 👍

@deepakunni3 deepakunni3 merged commit d3e81f0 into OBOFoundry:master Feb 19, 2026
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Crispae commented Feb 19, 2026

@deepakunni3 Thanks for reviewing the request and merging it. The ontology is not indexed in ontobee, ols and on bioportal. I guess ontobee and ols should automatically index it from bioportal or I have make request for indexing?

Thanks

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@Crispae I see PBPKO already on BioPortal. It might take a few days to index on Ontobee and OLS.
Please feel free to create a ticket if you don't see it a week's time.

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